Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015787824.1_cds_XP_016515592.1_262
CDS Infomation

[gene=LOC107832261] [db_xref=GeneID:107832261] [protein=beta-amylase 1, chloroplastic-like] [protein_id=XP_016515592.1] [location=join(26471..27072,28135..28345,28446..28556,28657..29463)] [gbkey=CDS]
Sequence

ATGGCGATGAGTATGCCACACCAGATCTGTGCCTTATCAGGAACACCGTTAACGGCGGAG
ACCGGCGGTGAAGTTCCGGCGAAGGGAAACACAACTGCATCAGCTGTATGGAGAACGCCG
TTGACGAATCTAAGAGTATCGGTGCAGAAGACAGGAGCTGACGTGGACATGTTGTCGCCG
ACGCCATCTCCGCCGTTGAGTCCGCTGAAAGGAGGAATGCGGCCGGATTTATCTGTAGCG
TGTCAAGCACTAATGGAAGCGCCGGCGGAAACGGCAGCGGAGAGAGAGCATAGGCTCGGG
AATTCTCCGGAAAAAGGGAAAGGAGTGCCGGTGTTTGTTATGATGCCGTTGGACAGCGTG
AAGATGGATCATACGGTGAATAGGAAGAAGGCGATGAACGCAAGTTTGCAGGCGTTGAAA
AGCGCAGGAGTGGAAGGGATCATGATGGATGTGTGGTGGGGATTGGTGGAGAGAGACGCG
CCGGGAGAGTACAATTGGGGCGGTTACGCTGAGCTATTGGAAATGGCGAAGAAGCATGGG
CTCAAAGTCCAGGCTGTCATGTCGTTCCATCAATGTGGCGGAAACGTCGGTGATTCCTGC
ACGATCCCTCTTCCTAGGTGGGTTGTTGAGGAGATGGAGAAGGACCCAGACCTTGCATAC
ACAGATCAGTGGGGAAGGAGGAATTATGAGTATGTATCGCTCGGTTGTGACACACTTCCA
GTTCTTAAAGGGAGGAGTCCTGTCCAATGTTATTCTGATTTCATGAGAGGGTTTAGAGAT
AGATTTGAGAACCTGCTAGGGGACACCATTATGGAAATTCAAGTTGGAATGGGTCCGGCT
GGAGAGCTCCGTTACCCATCCTACCCTGAACAAGACGGAACATGGAAATTCCCTGGAATT
GGGGCTTTTCAGTGTTATGACAAGTACATGATCAGCAGCTTAAAGGCTGCAGCAGAAGCT
TTTGGCAAGCCTGAATGGGGACACACAGGTCCAACAGACGCTGGTCACTACAACAATTGG
CCAGAGGACACCAACTTTTTCAGGAAGGAAGGTGGTGGCTGGGATGGTGAATATGGGGAA
TTCTTCCTCACTTGGTATTCTCAAATGCTTTTGAACCATGGTGAGAGGATATTGCAATCA
GCCAAGGCAATATTCCATGACAAGGGCGTTAAGATTTCAGTTAAGATCGCAGGCATTCAC
TGGCACTATGGAACAAGGTCCCATGCCCCTGAGCTCACGGCTGGGTACTACAACACCCGT
TTCCGTGATGGTTACCTTCCCATTGCCCAGATGCTTGCCCGCCACGGTGCAATTTTCAAC
TTCACATGTGTTGAGATGCGAGACCATGAGCAGCCACAAGATGCGCAATGTGCACCCGAA
AAGTTGGTTAGGCAAGTGGCGTTAGCAACTCAGGAAGCTCAAGTTCCACTTGCTGGGGAG
AATGCATTGCCACGATATGACGACTATGCACATGAACAGATCCTTCAAGCATCCTCATTG
AATATCGATGATCAATCAAGTGACAGAGAGATGTGTGCATTTACTTATTTGAGGATGAAT
CCAGACCTGTTCCATCCTGATAATTGGAGGCGATTCGTCGCTTTTGTGAAGAAAATGAAA
GAAGGAAAGGACGCGCACCGCTGTCAGGAACAACTAGAGCAAGAGGCAGAACATTTTGTG
CATATAACTCAGCCTTTAGTGCAAGAAGCTGCAGTGGCCCTCATGCACTAA

Peptide Sequence

PEP ID

XP_016515592.1
PEP Infomation

PREDICTED: beta-amylase 1, chloroplastic-like [Nicotiana tabacum]
Sequence

MAMSMPHQICALSGTPLTAETGGEVPAKGNTTASAVWRTPLTNLRVSVQKTGADVDMLSP
TPSPPLSPLKGGMRPDLSVACQALMEAPAETAAEREHRLGNSPEKGKGVPVFVMMPLDSV
KMDHTVNRKKAMNASLQALKSAGVEGIMMDVWWGLVERDAPGEYNWGGYAELLEMAKKHG
LKVQAVMSFHQCGGNVGDSCTIPLPRWVVEEMEKDPDLAYTDQWGRRNYEYVSLGCDTLP
VLKGRSPVQCYSDFMRGFRDRFENLLGDTIMEIQVGMGPAGELRYPSYPEQDGTWKFPGI
GAFQCYDKYMISSLKAAAEAFGKPEWGHTGPTDAGHYNNWPEDTNFFRKEGGGWDGEYGE
FFLTWYSQMLLNHGERILQSAKAIFHDKGVKISVKIAGIHWHYGTRSHAPELTAGYYNTR
FRDGYLPIAQMLARHGAIFNFTCVEMRDHEQPQDAQCAPEKLVRQVALATQEAQVPLAGE
NALPRYDDYAHEQILQASSLNIDDQSSDREMCAFTYLRMNPDLFHPDNWRRFVAFVKKMK
EGKDAHRCQEQLEQEAEHFVHITQPLVQEAAVALMH

Transcript Sequence

Gene sequence data has not been registered.